Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGCAGGTTCTCACCCTCTCTAGG&CCTGATCCTTCTGCCGTCAAACCAGAAGACTGGGATGAAAGTGAACCTGCCC
(((((((((((((((..(((.((&.))...)))..))).)))....))))))))).
Details
MiRNAhsa-miR-657
RefseqIDNM_004362
GeneSymbolCLGN
Binding site973,1025
Score0.872
Seed1
Au0.574
Energy-26.1
Binding len32
Me-4.171
Phylopstem5.0108784
Phylopflank5.0004454250000006
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure