Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTAGGGCCCTGGCTCCATCTCC&GGATGGAGAATGGGAGGCACCTC
..((((((((..((((((((..&))))))))....)).))).))).
Details
MiRNAhsa-miR-1296-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1131,1154
Score0.923
Seed1
Au0.5
Energy-22.1
Binding len23
Me-11.129
Phylopstem3.2972260125
Phylopflank3.825076375000001
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure