Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGTGGGGCTTCGACCCTAACC&AGGAGTATGGAGACCTCCACTG
.(((((((((((((((((....&))).)).))))).)).))))).
Details
MiRNAhsa-miR-1296-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1227,1249
Score0.846
Seed1
Au0.574
Energy-19.8
Binding len22
Me-3.793
Phylopstem4.701261338095238
Phylopflank3.8891276250000018
Longest consecutive pairings5
Position of longest consecutive pairings10
Pairings in 3prime end4
PositionCDS
2D Structure