Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGTGCCTGCTATGTGCCAGGCA&CCTGGTGACAGAGGACTGGTATTA
((((((.(((.(((((((((..&)))))).)))..)).).)))))).
Details
MiRNAhsa-miR-1271-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site436,460
Score0.846
Seed0
Au0.603
Energy-18.8
Binding len24
Me-8.306
Phylopstem2.9476137000000002
Phylopflank3.3965183349999992
Longest consecutive pairings6
Position of longest consecutive pairings18
Pairings in 3prime end6
PositionCDS
2D Structure