Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCCTGGGAGTGACTTC&GTCACTGCCGAAAACAGGCCGCAAGAGAGATAATCAATATGCAT
.((((((.(((((((((((((...&)))))).)).....))))).)).................)))).
Details
MiRNAhsa-miR-1301-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site83,127
Score0.923
Seed1
Au0.559
Energy-21.7
Binding len44
Me-6.107
Phylopstem0.32294372631578944
Phylopflank0.6558383462499999
Longest consecutive pairings6
Position of longest consecutive pairings38
Pairings in 3prime end5
Position5UTR
2D Structure