Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCCTGGGAGTGACTTC&GGTGTATTAAAACAGTTAATGGCAGCTGCT
..(((((((((...((.((.....&.)).))...))))))))).
Details
MiRNAhsa-miR-1301-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1489,1519
Score0.846
Seed1
Au0.574
Energy-22.9
Binding len19
Me-10.45
Phylopstem3.399432888888889
Phylopflank3.2375468799999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure