Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCATTCGGCTGTCCAGATGTA&GTCTGGGTCAGAGGATGAGA
(((((((..((((((((((...&))))))).))).))))))).
Details
MiRNAhsa-miR-1298-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1854,1874
Score0.846
Seed1
Au0.603
Energy-20.0
Binding len20
Me-7.308
Phylopstem5.991980345454545
Phylopflank4.1714919450000005
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end5
PositionCDS
2D Structure