Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCAGAAGCAGGGAGGTTCTCCCA&TGGGAGGCACCTCAGATTCTT
...((((.....((((((((((((&))))))).)))))...)))).
Details
MiRNAhsa-miR-298
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1141,1162
Score0.846
Seed0
Au0.485
Energy-20.7
Binding len21
Me-17.299
Phylopstem3.2303623076923076
Phylopflank3.77598761875
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure