Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGCCCCACGCACCAGGGTAAGA&AGCCTGGTGTATTAAAACAGTTAATGGCAGCTGCTGAAGGGCA
..((((..(((((((((.(....&).)))))))).........................)..)))).
Details
MiRNAhsa-miR-874-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1484,1527
Score0.923
Seed0
Au0.574
Energy-18.8
Binding len43
Me-8.814
Phylopstem3.4394869
Phylopflank3.5017420249999995
Longest consecutive pairings8
Position of longest consecutive pairings33
Pairings in 3prime end3
PositionCDS
2D Structure