Details of Duplex


2D Structure dot-bracket from RNAduplex"
GACTGACACCTCTTTGGGTGAA&GAGGTGTTAGTTG
((((((((((((..........&)))))))))))).
Details
MiRNAhsa-miR-888-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site838,851
Score1.0
Seed1
Au0.618
Energy-19.5
Binding len13
Me-7.052
Phylopstem4.836845333333333
Phylopflank4.23452043625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure