Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTTGGGAGCCCTGTTAGACTC&AGTTAATGGCAGCTGCTGAAGGGCACCCATGG
(.((((.(((((.((((....&.))))))))).)))).).
Details
MiRNAhsa-miR-887-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1502,1534
Score1.0
Seed0
Au0.544
Energy-19.1
Binding len18
Me-7.934
Phylopstem2.2933218
Phylopflank2.9655348525000003
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure