Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCAGTTACCGCTTCCGCTACCGC&GCGGCCGCCGGCGGGACTGGT
((((((.(((((...((..((((&))))..)).))))))))))).
Details
MiRNAhsa-miR-935
RefseqIDNM_004362
GeneSymbolCLGN
Binding site15,36
Score0.923
Seed0
Au0.308
Energy-24.7
Binding len21
Me-8.363
Phylopstem-0.39669233333333337
Phylopflank0.3486023205263159
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure