Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCAGTTACCGCTTCCGCTACCGC&GGAGAAGTATATTTTGCAGAAACTTTTGATAGTGGAAGGTTGGCTGGA
(((((((.(.(((((((((.((.&.)).)))))))))).))))))).
Details
MiRNAhsa-miR-935
RefseqIDNM_004362
GeneSymbolCLGN
Binding site292,340
Score1.0
Seed1
Au0.632
Energy-23.2
Binding len23
Me-7.494
Phylopstem2.5913401111111107
Phylopflank2.3958359587499993
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure