Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGAGCTGAGGCTCTGGGGGTG&ACCTCCAGATGTAGACCTTAAAAAGTTCTTTAC
(((((((((((((((((((((((.&)))))))))....).))))....))))))))).
Details
MiRNAhsa-miR-939-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site753,786
Score1.0
Seed1
Au0.603
Energy-24.4
Binding len33
Me-3.938
Phylopstem5.805133596875001
Phylopflank3.853148017499999
Longest consecutive pairings9
Position of longest consecutive pairings24
Pairings in 3prime end7
PositionCDS
2D Structure