Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCGTCGCCGCCACCCGAGCCG&GGCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTGTGGTGAGTGGA
(((((((((.(((((((.(((&.))).))))))))))))).))).
Details
MiRNAhsa-miR-1181
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1146,1196
Score1.0
Seed1
Au0.559
Energy-27.2
Binding len23
Me-5.18
Phylopstem2.2403572
Phylopflank3.70554287625
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure