Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGGGTCTTGGGAGGGATGTGAC&GTCGGATTGGGTGTGGTGAGTGGAAACCTCCCATGATAGATAACCCA
..(((((.((((((((((.((((&)))).)))..................))))))).)).......))).
Details
MiRNAhsa-miR-1182
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1172,1219
Score0.923
Seed0
Au0.529
Energy-20.1
Binding len47
Me-7.271
Phylopstem4.237409500000001
Phylopflank4.00502237125
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure