Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGAGGGCATGCAGGCCTGGATGGGG&CTCCACTGGTCGATAATCCTAACTATCAGGGAATCTGGAGTCCTCGA
.(((((((.(.(((((((((.(((((&.)))))....)))))...)))).)))))))).
Details
MiRNAhsa-miR-1226-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1241,1288
Score0.923
Seed1
Au0.618
Energy-22.6
Binding len32
Me-7.674
Phylopstem2.952295833333334
Phylopflank4.166452126249999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure