Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGGGCCAGGCGGTGG&CTGCTGGCTGGCTTGATG
((.(((((((.((((((&)))))).))))))).)).
Details
MiRNAhsa-miR-1227-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1052,1070
Score0.923
Seed0
Au0.618
Energy-21.8
Binding len18
Me-8.32
Phylopstem4.388379428571429
Phylopflank5.215314975
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure