Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGGGCCAGGCGGTGG&TCACTGCCGAAAACAGGCCGCAA
.((.((((.((((((((&)))))))).......)))).)).
Details
MiRNAhsa-miR-1227-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site84,107
Score1.0
Seed0
Au0.529
Energy-20.7
Binding len23
Me-7.882
Phylopstem0.393604375
Phylopflank0.617175785
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end8
Position5UTR
2D Structure