Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGTGCCACCCTTTTCCCCAG&CTGATGACTGGAATGAAGACACGGATGGAGAATGGGAGGCACC
.(((((.(((((((((((((&.))))...............)))))).))).))))).
Details
MiRNAhsa-miR-1227-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1109,1152
Score0.923
Seed0
Au0.515
Energy-23.1
Binding len37
Me-5.337
Phylopstem3.7504628999999983
Phylopflank3.78647639375
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end8
PositionCDS
2D Structure