Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGGTAGGGTTTGGGGGAGAGCG&GCCTCCTAGAGGATGTGGTTCCTCCTATCAAACCTCCCAA
.((((..((((((((((((((((.&.)))).)))).)))))))))))).
Details
MiRNAhsa-miR-1229-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site875,915
Score0.885
Seed0
Au0.588
Energy-24.5
Binding len24
Me-7.238
Phylopstem4.496368277777778
Phylopflank4.7752151312499995
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure