Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGGTAGGGTTTGGGGGAGAGCG&GCAAAAATTCCTGATCCTTCTGCCGTCAAACCAGAAGACTGGGATGAAAGTGAACCTGCCCAA
.((((((((((((((.((((((..&.)))).)).))))))).......................))))))).
Details
MiRNAhsa-miR-1229-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site964,1027
Score0.846
Seed1
Au0.574
Energy-24.2
Binding len47
Me-4.026
Phylopstem4.849833297297296
Phylopflank5.464560556250001
Longest consecutive pairings7
Position of longest consecutive pairings31
Pairings in 3prime end6
PositionCDS
2D Structure