Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGTCTGGGCGGACAGCTGC&GCAGCTGCTGAAGGGCACC
((((((...(((.(((((((&))))))))))..)))))).
Details
MiRNAhsa-miR-1231
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1510,1529
Score1.0
Seed0
Au0.574
Energy-23.2
Binding len19
Me-10.14
Phylopstem4.648078142857143
Phylopflank2.8420349475
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure