Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGTCTGGGCGGACAGCTGC&AGCTGTCACTGCCGAAAACAGGCCGCA
((((((((((((((((((..&))))))).).))).....))))).)).
Details
MiRNAhsa-miR-1231
RefseqIDNM_004362
GeneSymbolCLGN
Binding site79,106
Score1.0
Seed1
Au0.529
Energy-21.2
Binding len27
Me-3.938
Phylopstem0.5291049461538463
Phylopflank0.6737822075
Longest consecutive pairings7
Position of longest consecutive pairings20
Pairings in 3prime end6
Position5UTR
2D Structure