Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGTGACAGGGGAAATGGGGA&TCCTAATCCAGATTATTTCGAAGATGATCATCCATTTCTTCTGACTTCTTTCAG
((((.(((((((((((((((((&.)).)))))))))))))...)).)))).
Details
MiRNAhsa-miR-1236-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1293,1347
Score1.0
Seed0
Au0.618
Energy-19.9
Binding len28
Me-8.057
Phylopstem3.8182358095238103
Phylopflank3.4910738025
Longest consecutive pairings13
Position of longest consecutive pairings11
Pairings in 3prime end8
PositionCDS
2D Structure