Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGAGTGGGAGCCCCAGTGTGTG&GCAGCTGCTGAAGGGCACCCATGGCT
((..(((((.((((((((.(((.&)))...))))..)))).))))).)).
Details
MiRNAhsa-miR-1238-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1510,1536
Score0.846
Seed0
Au0.529
Energy-21.2
Binding len26
Me-9.77
Phylopstem3.5439525000000005
Phylopflank3.0733171099999996
Longest consecutive pairings5
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure