Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGAGTGGGAGCCCCAGTGTGTG&GCCAGAGTGGTTTACCCCATTCACA
(((((((((((((.(..((.((.&))))..).))))...))))))))).
Details
MiRNAhsa-miR-1238-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2641,2666
Score0.923
Seed1
Au0.662
Energy-21.2
Binding len25
Me-5.027
Phylopstem5.616532062499999
Phylopflank3.7327455237499994
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure