Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTTCCTCGTCTGTCTGCCCC&GGGTCAGAGGATGAGA
....(((((((.(((((((.&))).))))))))))).
Details
MiRNAhsa-miR-1238-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1858,1874
Score0.846
Seed0
Au0.603
Energy-19.6
Binding len16
Me-12.893
Phylopstem5.317382875
Phylopflank4.1233820975
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure