Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTCCTGAGCCATTCTGAGCCTC&GGGCTGCAGATGGTTGGAGA
((((..(((((.(((((((((.&))))).))))))))))))).
Details
MiRNAhsa-miR-1200
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1436,1456
Score0.923
Seed0
Au0.603
Energy-23.0
Binding len20
Me-13.304
Phylopstem3.9941778
Phylopflank2.616921895000001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure