Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTCCTGAGCCATTCTGAGCCTC&GCCAGAGTGGTTTAC
....((((((((((((.((...&)))))))))))))).
Details
MiRNAhsa-miR-1200
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2641,2656
Score1.0
Seed0
Au0.676
Energy-19.2
Binding len15
Me-9.547
Phylopstem4.452125166666666
Phylopflank4.18893790125
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure