Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCGTGGCCTGGTCTCCATTAT&TGGTCTGAAGAGACGCGGGGACCAAGTGGCAACGAC
((((.(((((((((((.....&.))))))))...))).)))).
Details
MiRNAhsa-miR-1204
RefseqIDNM_004362
GeneSymbolCLGN
Binding site32,68
Score0.846
Seed0
Au0.441
Energy-23.1
Binding len21
Me-8.057
Phylopstem0.21269317142857144
Phylopflank0.3808537489130436
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end3
Position5UTR
2D Structure