Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCGTGGCCTGGTCTCCATTAT&ATGGAGACCTCCACT
..((((...(((((((((...&))))))))).)))).
Details
MiRNAhsa-miR-1204
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1233,1248
Score0.846
Seed0
Au0.588
Energy-21.1
Binding len15
Me-9.871
Phylopstem3.6605546666666657
Phylopflank3.9153423750000003
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure