Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCACTGTTCAGACAGGCGGA&TCTGCCGTCAAACCAGAAGACTGGGATGAAAGTGAA
(((((.(((((((.((((((&))))))))).................))))))))).
Details
MiRNAhsa-miR-1208
RefseqIDNM_004362
GeneSymbolCLGN
Binding site982,1018
Score0.846
Seed0
Au0.544
Energy-16.8
Binding len36
Me-6.695
Phylopstem5.1195302499999995
Phylopflank5.243675906250001
Longest consecutive pairings9
Position of longest consecutive pairings27
Pairings in 3prime end7
PositionCDS
2D Structure