Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGCTGGATCAGTGGTTCGAGTC&GATGATGAACCAAAATTTATCCCTGATCCT
....((((((((((((((.(((&)))..)))))))..........))))))).
Details
MiRNAhsa-miR-1287-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1066,1096
Score0.846
Seed0
Au0.588
Energy-20.0
Binding len30
Me-9.547
Phylopstem4.047310645833333
Phylopflank4.773971482500001
Longest consecutive pairings7
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure