Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGAGTCCAGGAATCTGCATTTT&GAAGTAGCAGATCACTGGGCTGCAG
((.(((((((..(((((((((((&))))).))))))..))))))).)).
Details
MiRNAhsa-miR-1289
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1420,1445
Score0.846
Seed0
Au0.559
Energy-26.7
Binding len25
Me-11.667
Phylopstem2.7185353333333335
Phylopflank3.0171230374999993
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end8
PositionCDS
2D Structure