Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGATTTTTGGATCAGGGA&TCCCTGATCCTAATGCTGAAAAACCT
.((.(((((((((((((((&)))))))))).......))))).)).
Details
MiRNAhsa-miR-1290
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1085,1111
Score0.846
Seed0
Au0.588
Energy-20.0
Binding len26
Me-6.825
Phylopstem4.805012295454547
Phylopflank4.32786431375
Longest consecutive pairings10
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure