Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGTGAGGTTGGCATTGTTGTCT&AGAGAAACATGCCAAACCTCCAG
((.(((((((((((..((.(((&))).))..))))))).)))))).
Details
MiRNAhsa-miR-1294
RefseqIDNM_004362
GeneSymbolCLGN
Binding site738,761
Score0.846
Seed0
Au0.618
Energy-19.7
Binding len23
Me-6.464
Phylopstem4.5708440999999995
Phylopflank4.3080261675
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure