Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCTGGAATTCTGTGTGAGGGA&GCACAGGATCTGGAGA
((((((.(((((((((......&))))))))))))))).
Details
MiRNAhsa-miR-1299
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1892,1908
Score1.0
Seed0
Au0.544
Energy-16.8
Binding len16
Me-5.481
Phylopstem3.3330533333333334
Phylopflank4.490640046250002
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure