Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTTTCAACTCTAATGGGAGAGA&CTCCCAAAGAAATTGAAGAT
(((((((.(((..((((((...&)))))).)))..))))))).
Details
MiRNAhsa-miR-1305
RefseqIDNM_004362
GeneSymbolCLGN
Binding site908,928
Score0.923
Seed1
Au0.588
Energy-15.6
Binding len20
Me-10.887
Phylopstem2.7039380999999993
Phylopflank4.941826333750001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure