Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGTAGTTGGTTTGTATGAGATGGTT&CCATTCACAAAATTTCTTATGCATACATTGCTATTG
.((((((..((.(((((((((.....&.))))))))).))...)))))).
Details
MiRNAhsa-miR-1244
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2657,2693
Score0.923
Seed1
Au0.765
Energy-16.4
Binding len23
Me-10.51
Phylopstem5.182316666666667
Phylopflank3.63385077375
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end3
Position3UTR
2D Structure