Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGAGGGAGGAGATGGGCCAAGTT&GATGTGGTTCCTCCTATCAAACCTCCCA
....((((((.(((((((((.(((&))).))).....))))))...)))))).
Details
MiRNAhsa-miR-1249-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site886,914
Score0.846
Seed0
Au0.588
Energy-21.1
Binding len28
Me-12.371
Phylopstem5.165620407142856
Phylopflank4.942236492499999
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure