Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACGCCCTTCCCCCCCTTCTTCA&GGAAGGTTGGCTGGATGGGTC
..((((.(((.((((((((...&))))))..))..))).)))).
Details
MiRNAhsa-miR-1249-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site325,346
Score0.846
Seed0
Au0.588
Energy-18.6
Binding len21
Me-9.325
Phylopstem2.210129
Phylopflank2.325027339999999
Longest consecutive pairings6
Position of longest consecutive pairings15
Pairings in 3prime end5
PositionCDS
2D Structure