Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACATTTTCCAGCCCATTCA&GAAGTAGCAGATCACTGGGCTGCAGATGGTTGGAGATGG
.((((((((((((((....&.))))))).........))))))).
Details
MiRNAhsa-miR-1250-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1420,1459
Score0.846
Seed1
Au0.574
Energy-17.2
Binding len25
Me-4.026
Phylopstem2.9577858695652175
Phylopflank2.8185857725
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end4
PositionCDS
2D Structure