Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGCTTTGCTCAGCCAGTGTAG&TACCTGGTGACAGAGGACTGGTATTAAAATCTAGAGCAAAGCA
.(((((((((.((((((.(..&.).))))))...........))))))))).
Details
MiRNAhsa-miR-1251-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site434,477
Score0.846
Seed1
Au0.618
Energy-21.7
Binding len30
Me-6.618
Phylopstem2.531962722222222
Phylopflank4.063193928749998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure