Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGTGAATGATGGGTTCTGACC&CAGAGTGGTTTACCCCATTCACA
.(((((((..((((...((((&.)))).))))))))))).
Details
MiRNAhsa-miR-1257
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2643,2666
Score0.923
Seed1
Au0.662
Energy-17.3
Binding len18
Me-7.061
Phylopstem5.153958285714286
Phylopflank3.7518864487499983
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure