Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGTTAGGATTAGGTCGTGGAA&TCCACTGGTCGATAATCCTAACTA
((((((((((((((((((((.&))))).))))..))))))))))).
Details
MiRNAhsa-miR-1258
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1242,1266
Score0.885
Seed1
Au0.544
Energy-21.0
Binding len24
Me-3.938
Phylopstem4.369213130434781
Phylopflank4.17197082625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure