Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGATGTGGTCAAGTGTTGTT&CAGCATGCCAGACCTGAACTTTAATCAGTCTGCACATCCTGT
((((((((((((..((((((..&))))))....))))...................)))))))).
Details
MiRNAhsa-miR-1265
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2007,2049
Score0.846
Seed1
Au0.647
Energy-20.0
Binding len42
Me-6.084
Phylopstem2.9150298709677425
Phylopflank3.4465238375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure