Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCGCCTCCTCCTCTCCC&GGAGAATGGGAGGCA
..(((((((..(((((.&)))))..))))))).
Details
MiRNAhsa-miR-1281
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1135,1150
Score1.0
Seed1
Au0.515
Energy-22.4
Binding len15
Me-9.024
Phylopstem2.0416774285714285
Phylopflank3.7075031687500006
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure