Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCTATACAGACCCTGGCTTTTC&GAAGAGCTAAATGCAATAAAGTTTCTGTATGGT
.(((((((((..((((((((((&))))))))...........))..))))))))).
Details
MiRNAhsa-miR-1284
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2370,2403
Score0.846
Seed1
Au0.691
Energy-18.1
Binding len33
Me-9.965
Phylopstem3.588686380952381
Phylopflank3.786959405
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure