Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGACTGCCCTGATCTGGAGA&CTCCACTGGTCGATAATCCTAACTATCAGGGAATCTGGAGTCCT
.(((((.(((((((.(((((.&)))))...................))))))).......))))).
Details
MiRNAhsa-miR-1288-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1241,1285
Score0.846
Seed0
Au0.603
Energy-18.7
Binding len44
Me-6.072
Phylopstem3.4923591428571426
Phylopflank4.48892888875
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure